PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10024030
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 337aa    MW: 35857.5 Da    PI: 8.1878
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10024030genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.91.7e-21240303164
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                  e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L+  N++Lk+ + +l++e++klk+e+e
  Lus10024030 240 ERELKRQKRKQSNRESARRSRLRKQAECEELQHRVQNLTRDNQTLKNDVLQLSEECEKLKAENE 303
                  89***********************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.5E-21191IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1705.8E-19234300No hitNo description
PfamPF001701.6E-19240303IPR004827Basic-leucine zipper domain
SMARTSM003385.2E-20240304IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.162242305IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-10243299No hitNo description
CDDcd147028.58E-22245295No hitNo description
PROSITE patternPS000360247262IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MGTGEKSSPA KPSKAAASST QEIPSAPAYP EWPGSMQVYY GAGATPPFYP STVASPHPYV  60
YHQHPFVPHY GTPVPYPAMY PPGGVYPHPS MSITPNSVAP STDTEGKRAN GKDQSSSKKS  120
KRTPAKKAGE SGKSGSGNDA VSHSGESGSD GGSSDASDEQ DYSASKKGSF NQMLADASAQ  180
GAVPIVSVPG TKLNIGIELW NASPAAAGTG PAKLRTNPPG GSSAIVPVPG AMPEPWLQDE  240
RELKRQKRKQ SNRESARRSR LRKQAECEEL QHRVQNLTRD NQTLKNDVLQ LSEECEKLKA  300
ENESIKKKLE ESYRPEAIQQ VEGNKETSSP ADEENS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1256262RRSRLRK
2256263RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010999953.11e-131PREDICTED: G-box-binding factor 1-like
SwissprotP427741e-88GBF1_ARATH; G-box-binding factor 1
TrEMBLA0A067K6S61e-130A0A067K6S6_JATCU; Uncharacterized protein
STRINGPOPTR_0007s12460.11e-130(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59333450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.27e-73G-box binding factor 1